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In plant stress response, one protein lures, binds its own killer

Postdoctoral researcher Hye Lin Park works in Gyeong Mee Yoon’s lab. Yoon, an associate professor of botany and plant pathology studies the plant stress response. (Photo by Gyeong Mee Yoon) Postdoctoral researcher Hye Lin Park works in Gyeong Mee Yoon’s lab. Yoon, an associate professor of botany and plant pathology studies the plant stress response. (Photo by Gyeong Mee Yoon)

Like the plot of a mystery novel, research has found a twist in the way plants cannibalize their own cells to survive under stress.

In response to drought, cold, lack of sunlight and other stress, cellular proteins interact in different ways to help a plant survive. A primary protective act is the destruction and recycling of some of the plant’s own cellular materials into what is needed for others.

A Purdue University-led research team has identified proteins involved in this protective process and discovered how they act upon each other. A better understanding of these mechanisms could lead to ways to help plants withstand severe conditions.

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Normal growth condition and (Bottom) carbon starvation stress condition. Unlike wild type, the SINAT mutant did not survive carbon starvation stress. Purdue University professor Gyeong Mee Yoon discovered a mechanism involved in plants' response to stress. (Photo courtesy of Gyeong Mee Yoon)

“We identified three proteins involved in this process and discovered a surprising co-regulation mechanism,” said Gyeong Mee Yoon, associate professor of botany and plant pathology at Purdue, who led the study. “One protein, called ACC synthases (ACS), an enzyme regulating ethylene biosynthesis, recruits the two other proteins and acts like a scaffold, or glue holding them together. Interestingly, the two proteins are ones that under normal growth conditions break down ACS. It lures its own killers into a bind that causes them to degrade each other instead.”

Yoon also found that a byproduct of the process is an increase in the plant hormone ethylene. The role of ethylene in ripening produce in a fruit bowl or refrigerator may be familiar, but it also influences plant growth, development and plant stress responses. It has been a key target of research, she says.

“We know that ethylene is somehow involved in the stress response and autophagy, or the destruction and recycling of cellular materials, but we don’t know exactly how it is involved,” said Yoon, who also is a member of Purdue’s Center for Plant Biology and part of Purdue’s Next Moves plant sciences initiative. “This is one clue as we seek to solve the mystery and to understand ethylene biosynthesis and signaling in autophagy regulation.”

Gyeong Mee Yoon (Photo courtesy of Gyeong Mee Yoon) Gyeong Mee Yoon (Photo courtesy of Gyeong Mee Yoon)

The team used Arabidopsis as the plant model. A paper detailing the results is published in the journal the Proceedings of the National Academy of Sciences or PNAS.

The team created a carbon-deficient environment for the plants, similar to what would happen without adequate sunlight. Without sunlight, plants cannot perform photosynthesis to create carbon needed for growth.

When starved for carbon, it seems the plant activates the brassinosteroid signaling pathway, Yoon said. This signaling activates an additional protein, called 14 3 3, that enables ACS to attract its enemies and make them degrade each other.

The two proteins lured to ACS are categorized as E3 ligases, and called Seven-in Absentia (SINAT) and Ethylene overproducer 1-like 2 (EOL2). These ligases normally do not interact with each other and both degrade ACS. Through this stress-response process where ACS binds the two ligases, the level of ACS in the cell increases. The increase in ACS in turn increases synthesis of ethylene, she said.

By inhibiting the binding of ACS and the E3 ligases, the team was able to disrupt the stress-response process. They found that if the co-regulation of these proteins is disrupted, the plants cannot survive carbon starvation, Yoon says.

“This is a way the plant fine-tunes the balance of different proteins and levels of hormones,” she said. “When a plant is under stress, the balance shifts and this triggers a cascade of events that lead to more cellular recycling to keep the plant alive. When the stress is over, the balance shifts again and the system returns to normal.”

This was the first time ACS has been shown to act as a scaffold, and it could turn out to be what plant geneticists call a “moonlighting” protein, Yoon said.

“This is evidence ACS could be a ‘moonlighting’ protein, where it performs more than one function, but we need to know more,” Yoon said. “Perhaps it serves as a scaffold to bring together proteins in other pathways. It may be more important than what we know so far, and we plan to investigate this.” 

Purdue Startup and The National Science Foundation (#MCB-1817286) funded Yoon’s work.

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